Motif IL_83596.1 Version IL_83596.1 of this group appears in releases 3.58 to 3.61
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 1-6 | 2-5 | 3-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_6CK5_005 | 6CK5 | 0.0000 | 1 | A | Guanidine-I riboswitch | U | 80 | A | 81 | G | 82 | * | C | 94 | G | 95 | G | 97 | cWW | tHH | cWW | |
| 2 | IL_4KNQ_003 | 4KNQ | 0.9201 | 0 | Isolated non-canonical cWW pair | B | RNA (20-mer) | C | 210 | C | 211 | G | 212 | * | C | 210||||4_555 | C | 211||||4_555 | G | 212||||4_555 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAG*CGGG | 1 |
| CCG*CCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A*GG | 1 |
| C*C | 1 |
- Annotations
-
- Isolated non-canonical cWW pair (1)
- (1)
- Basepair signature
- cWW-tHH-cWW
- Heat map statistics
- Min 0.92 | Avg 0.46 | Max 0.92
Coloring options: