Motif IL_84881.1 Version IL_84881.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | 4-7 | 5-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3BNN_007 | 3BNN | 0.2009 | 1 | C+D | A site of human ribosome | G | 12 | A | 13 | C | 14 | A | 15 | G | 17 | * | C | 5 | A | 6 | C | 7 | C | 8 | C | 9 | cWW | ncWWa | cWW | ||
| 2 | IL_3BNN_006 | 3BNN | 0.0000 | 1 | D+C | A site of human ribosome | G | 12 | A | 13 | C | 14 | A | 15 | G | 17 | * | C | 5 | A | 6 | C | 7 | C | 8 | C | 9 | cWW | cWWa | ncWB | cWW | |
| 3 | IL_5AJ0_171 | 5AJ0 | 0.9218 | 0 | A2 | LSU rRNA | C | 4888 | G | 4889 | U | 4890 | C | 4891 | A | 4892 | * | U | 4843 | C | 4844 | C | 4845 | U | 4846 | G | 4847 | cWW | ncWW | ncWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GACAAG*CACCC | 2 |
| CGUCA*UCCUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACAA*ACC | 2 |
| GUC*CCU | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-cWW-L-R-R-L-cWW
- Heat map statistics
- Min 0.20 | Avg 0.47 | Max 0.99
Coloring options: