Motif IL_85945.1 Version IL_85945.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 14 | 15 | 16 | 1-4 | 1-16 | 5-16 | 6-15 | 9-12 | 10-11 | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3J7Y_032 | 3J7Y | 0 | 0 | A | LSU rRNA | G | 2478 | C | 2479 | A | 2480 | A | 2481 | A | 2482 | U | 2483 | C | 2484 | U | 2485 | U | 2486 | A | 2487 | * | U | 2648 | U | 2649 | C | 2650 | A | 2651 | G | 2652 | C | 2653 | ntSW | cWW | csS | ncSs | cWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCAAAUCUUA*UUCAGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CAAAUCUU*UCAG | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-L-L-L-cSS-cSS-L-R-R-L-cWW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: