Motif IL_88579.1 Version IL_88579.1 of this group appears in releases 3.2 to 3.2
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 11 | 1-4 | 1-11 | 2-9 | 3-8 | 4-7 | 5-6 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V8P_243 | 4V8P | 0 | 3 | Kink-turn related (H) | D1 | LSU rRNA | U | 2152 | G | 2153 | A | 2154 | G | 2156 | G | 2157 | * | U | 2168 | G | 2169 | U | 2171 | G | 2172 | A | 2173 | A | 2175 | ncSs | cWW | tSS | tWW | tWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGACGG*UGAUGACA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GACG*GAUGAC | 1 |
Release history
| Release | 3.2 |
|---|---|
| Date | 2018-09-26 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Kink-turn related (H) (1)
- Basepair signature
- cWW-R-tSS-tWW-tWW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: