Motif IL_89587.1 Version IL_89587.1 of this group appears in releases 3.48 to 3.55
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 3-10 | 4-9 | 5-8 | 6-7 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V88_393 | 4V88 | 0.0000 | 0 | A6 | SSU rRNA | U | 117 | U | 118 | A | 119 | U | 120 | U | 121 | U | 122 | * | A | 295 | U | 296 | U | 297 | C | 298 | A | 299 | cWW | ntHS | cWw | cWw | cWW | |
| 2 | IL_5XTM_006 | 5XTM | 0.9694 | 1 | D | RNA (47-MER) | G | 8 | A | 9 | U | 10 | G | 11 | A | 13 | A | 14 | * | U | 35 | A | 36 | A | 37 | C | 38 | C | 39 | cWW | ncWWa | cWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUAUUU*AUUCA | 1 |
| GAUGAAA*UAACC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAUU*UUC | 1 |
| AUGAA*AAC | 1 |
Release history
| Release | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 | 3.54 | 3.55 |
|---|---|---|---|---|---|---|---|---|
| Date | 2021-08-18 | 2021-09-15 | 2021-10-13 | 2021-11-10 | 2021-12-08 | 2022-01-05 | 2022-02-02 | 2022-03-02 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-cWW-cWW-cWW
- Heat map statistics
- Min 0.97 | Avg 0.48 | Max 0.97
Coloring options: