Motif IL_89877.1 Version IL_89877.1 of this group appears in releases 3.15 to 3.17
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 1-4 | 2-3 | 2-4 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4ERD_001 | 4ERD | 0.0000 | 2 | C+D | RNA (22-mer) | C | 120 | C | 123 | * | G | 146 | G | 147 | cWW | cWW | ntsS | |
| 2 | IL_4V9F_025 | 4V9F | 0.9452 | 1 | Single bulged A | 0 | LSU rRNA | A | 788 | C | 789 | * | G | 856 | U | 858 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAC*GG | 1 |
| AC*GAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GA* | 1 |
| *A | 1 |
- Annotations
-
- (1)
- Single bulged A (1)
- Basepair signature
- cWW-cWW
- Heat map statistics
- Min 0.95 | Avg 0.47 | Max 0.95
Coloring options: