Motif IL_90106.2 Version IL_90106.2 of this group appears in releases 3.3 to 3.7

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4	break		5		6		7		8	1-8	2-7	3-6	4-5
1	IL_3BNR_011	3BNR	0.6488	1	C+D	A site of human mitochondrial ribosome, chain one + A site of human mitochondrial ribosome, chain three	G	15	C	16	A	17	G	19	*	C	5	A	6	C	7	C	8	cWW			cWW
2	IL_5J7L_299	5J7L	0.0000	1	DA	LSU rRNA	U	1520	G	1521	A	1522	G	1524	*	U	1468	A	1469	A	1470	G	1471	cWW	tSH	tHH	cWW
3	IL_4Y4O_222	4Y4O	0.2808	1	2A	LSU rRNA	C	1202	G	1203	A	1204	G	1206	*	U	1240	A	1241	A	1242	G	1243	cWW	tSH	tHH	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
GCAAG*CACC	1
UGAUG*UAAG	1
CGAUG*UAAG	1

Non-Watson-Crick part of the motif

Sequence	Counts
GAU*AA	2
CAA*AC	1

Release history

Release	3.3	3.4	3.5	3.6	3.7
Date	2018-03-08	2018-04-06	2018-05-04	2018-06-01	2018-06-29
Status	Updated, 2 parents	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (3)
Basepair signature: cWW-tSH-tHH-cWW
Heat map statistics: Min 0.28 | Avg 0.36 | Max 0.69

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