#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6 7 81-82-73-64-5
1 IL_4Y4O_2034Y4O0.808812A LSU rRNAC846G848A849C850*G927G928U930G931cWWtHScWW
2 IL_4Y4O_2224Y4O0.000012A LSU rRNAU1240A1241A1242G1243*C1202G1203A1204G1206cWWtHHtHScWW
3 IL_5J7L_2995J7L0.28081DA LSU rRNAU1468A1469A1470G1471*U1520G1521A1522G1524cWWtHHtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUGAC*GGUG1
UAAG*CGAUG1
UAAG*UGAUG1
Non-Watson-Crick part of the motif
SequenceCounts
AA*GAU2
UGA*GU1

Release history

Release3.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.53
Date2018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-05
StatusUpdated, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-tHH-tHS-cWW
    Heat map statistics
    Min 0.28 | Avg 0.44 | Max 0.88
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