Motif IL_90423.2 Version IL_90423.2 of this group appears in releases 3.15 to 3.17

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Annotation	Chain(s)	Standardized name		1		2		3		4	break		5		6		7		8	1-8	2-7	3-6	4-5
1	IL_3BNR_008	3BNR	0.6412	1	Minor groove platform related	C+D	A site of human mitochondrial ribosome, chain one + A site of human mitochondrial ribosome, chain three	C	7	A	8	C	9	C	10	*	G	13	A	15	A	16	G	17	cWW	cwW		cWW
2	IL_3BNR_011	3BNR	0.0000	1		C+D	A site of human mitochondrial ribosome, chain one + A site of human mitochondrial ribosome, chain three	G	15	C	16	A	17	G	19	*	C	5	A	6	C	7	C	8	cWW			cWW
3	IL_5J7L_287	5J7L	0.6444	1		DA	LSU rRNA	G	1202	U	1203	A	1204	G	1206	*	U	1240	A	1241	U	1242	C	1243	cWW	cwW	tHH	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CACC*GCAAG	1
GCAAG*CACC	1
GUAAG*UAUC	1

Non-Watson-Crick part of the motif

Sequence	Counts
AC*CAA	1
CAA*AC	1
UAA*AU	1

Release history

Release	3.15	3.16	3.17
Date	2019-02-08	2019-03-08	2019-04-05
Status	Updated, 2 parents	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (2)
Minor groove platform related (1)
Basepair signature: cWW-cWW-L-R-cWW
Heat map statistics: Min 0.64 | Avg 0.44 | Max 0.70

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