Motif IL_91698.1 Version IL_91698.1 of this group appears in releases 3.95 to 3.96
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 1-17 | 2-16 | 7-12 | 8-12 | 9-10 | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_8CRE_462 | 8CRE | 0.0000 | 0 | CM | SSU rRNA | U | 1506 | U | 1507 | G | 1508 | U | 1509 | G | 1510 | A | 1511 | A | 1512 | A | 1513 | C | 1514 | * | G | 1466 | C | 1467 | C | 1468 | A | 1469 | G | 1470 | C | 1471 | G | 1472 | A | 1473 | cWW | tWW | tHW | cWW | |
| 2 | IL_8P9A_448 | 8P9A | 0.0845 | 0 | sR | SSU rRNA | U | 1519 | U | 1520 | G | 1521 | U | 1522 | G | 1523 | A | 1524 | A | 1525 | A | 1526 | C | 1527 | * | G | 1480 | C | 1481 | C | 1482 | A | 1483 | G | 1484 | C | 1485 | G | 1486 | A | 1487 | cWW | tWW | ntHW | ncBW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUGUGAAAC*GCCAGCGA | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGUGAAA*CCAGCG | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-tWW-L-R-L-R-L-R-L-tHW-R-L-cWW
- Heat map statistics
- Min 0.08 | Avg 0.04 | Max 0.08
Coloring options: