Motif IL_91940.1 Version IL_91940.1 of this group appears in releases 4.10 to 4.10
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-2 | 1-7 | 3-6 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4WF9_003 | 4WF9 | 0.0000 | 0 | Minor groove platform with extra cWW | X | LSU rRNA | U | 480 | C | 481 | U | 482 | C | 483 | * | G | 42 | A | 43 | A | 44 | cSH | cWW | cWW | |
| 2 | IL_3MXH_001 | 3MXH | 0.5623 | 1 | Minor groove platform with extra cWW | R | Cyclic di-GMP-I riboswitch | G | 94 | A | 95 | G | 97 | G | 98 | * | C | 11 | A | 12 | C | 13 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCUC*GAA | 1 |
| GAUGG*CAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CU*A | 1 |
| AUG*A | 1 |
Release history
| Release | 4.10 |
|---|---|
| Date | 2026-05-20 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Minor groove platform with extra cWW (2)
- Basepair signature
- cWW-L-R-L-cWW
- Heat map statistics
- Min 0.56 | Avg 0.28 | Max 0.56
Coloring options: