Motif IL_92123.1 Version IL_92123.1 of this group appears in releases 0.6 to 0.6
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 1-3 | 1-12 | 3-11 | 4-5 | 4-10 | 6-9 | 7-8 | 10-12 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1GID_011 | 1GID | 0.0000 | 1 | B | P4-P6 RNA RIBOZYME DOMAIN | C | 121 | A | 122 | A | 123 | C | 124 | A | 125 | G | 126 | C | 127 | * | G | 195 | A | 196 | C | 197 | A | 198 | G | 200 | cWW | tWH | tHW | cWW | cWW | ncSS | |||
| 2 | IL_1X8W_003 | 1X8W | 0.3665 | 1 | A | Tetrahymena ribozyme RNA | C | 121 | A | 122 | A | 123 | C | 124 | A | 125 | G | 126 | C | 127 | * | G | 195 | A | 196 | C | 197 | A | 198 | G | 200 | cSS | cWW | ncSS | ncWW | cWW | cSS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAACAGC*GACAUG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AACAG*ACAU | 2 |
Release history
| Release | 0.6 |
|---|---|
| Date | 2012-04-02 |
| Status | New id, 2 parents |
Parent motifs
| Parent motif | Common motif instances | Only in IL_92123.1 | Only in the parent motif |
|---|---|---|---|
| IL_16360.1 Compare | IL_1GID_011 | IL_1X8W_003 | IL_1GID_004 |
| IL_86397.1 Compare | IL_1X8W_003 | IL_1GID_011 |
Children motifs
| Child motif | Common motif instances | Only in IL_92123.1 | Only in the child motif |
|---|---|---|---|
| IL_65137.1 Compare | IL_1GID_011 | IL_1X8W_003 | IL_1GID_004 |
| IL_12507.1 Compare | IL_1X8W_003 | IL_1GID_011 |
- Annotations
- Basepair signature
- 12_cSS,cWW-----cWW-cWW---cSS
- Heat map statistics
- Min 0.37 | Avg 0.18 | Max 0.37
Coloring options: