IL_1GID_004

3D structure

PDB id

1GID (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF A GROUP I RIBOZYME DOMAIN: PRINCIPLES OF RNA PACKING

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

CAACAGC*GACAUG

Length

13 nucleotides

Bulged bases

1GID|1|A|U|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65137.1

Basepair signature

cWW-L-cSS-tWH-tHW-L-cWW-cWW

Number of instances in this motif group

2

Unit IDs

1GID|1|A|C|121
1GID|1|A|A|122
1GID|1|A|A|123
1GID|1|A|C|124
1GID|1|A|A|125
1GID|1|A|G|126
1GID|1|A|C|127
*
1GID|1|A|G|195
1GID|1|A|A|196
1GID|1|A|C|197
1GID|1|A|A|198
1GID|1|A|U|199
1GID|1|A|G|200

Current chains

Chain A

P4-P6 RNA RIBOZYME DOMAIN

Nearby chains