Motif IL_65137.1 Version IL_65137.1 of this group appears in releases 0.7 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 1-12 | 3-11 | 4-10 | 6-9 | 7-8 | 10-12 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1GID_011 | 1GID | 0.0000 | 1 | B | P4-P6 RNA RIBOZYME DOMAIN | C | 121 | A | 122 | A | 123 | C | 124 | A | 125 | G | 126 | C | 127 | * | G | 195 | A | 196 | C | 197 | A | 198 | G | 200 | cWW | tWH | tHW | cWW | cWW | cSs |
| 2 | IL_1GID_004 | 1GID | 0.3999 | 1 | A | P4-P6 RNA RIBOZYME DOMAIN | C | 121 | A | 122 | A | 123 | C | 124 | A | 125 | G | 126 | C | 127 | * | G | 195 | A | 196 | C | 197 | A | 198 | G | 200 | cWW | ncWB | ntHW | cWW | cWW | cSs |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAACAGC*GACAUG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AACAG*ACAU | 2 |
Release history
| Release | 0.7 | 0.8 | 0.9 | 0.10 | 0.11 | 0.12 | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 | 1.15 | 1.17 | 1.18 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 | 2013-04-08 | 2013-05-04 | 2013-06-01 | 2013-07-01 | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 | 2014-06-20 | 2014-09-04 | 2014-10-07 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_65137.1 | Only in the parent motif |
|---|---|---|---|
| IL_92123.1 Compare | IL_1GID_011 | IL_1GID_004 | IL_1X8W_003 |
| IL_39165.1 Compare | IL_1GID_004 | IL_1GID_011 |
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-cSS-tWH-tHW-L-cWW-cWW
- Heat map statistics
- Min 0.40 | Avg 0.20 | Max 0.40
Coloring options: