#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7break 8 9 10 11 121-123-114-106-97-810-12
1 IL_1GID_0111GID0.00001BP4-P6 RNA RIBOZYME DOMAINC121A122A123C124A125G126C127*G195A196C197A198G200cWWtWHtHWcWWcWWcSs
2 IL_1GID_0041GID0.39991AP4-P6 RNA RIBOZYME DOMAINC121A122A123C124A125G126C127*G195A196C197A198G200cWWncWBntHWcWWcWWcSs

3D structures

Complete motif including flanking bases
SequenceCounts
CAACAGC*GACAUG2
Non-Watson-Crick part of the motif
SequenceCounts
AACAG*ACAU2

Release history

Release0.70.80.90.100.110.121.01.11.21.31.41.51.61.71.81.91.101.111.121.131.141.151.171.18
Date2013-02-172013-02-172013-02-172013-02-172013-02-172013-02-172013-03-042013-04-082013-05-042013-06-012013-07-012013-08-032013-08-312013-09-282013-11-052013-12-072014-01-042014-02-012014-03-012014-03-292014-04-272014-06-202014-09-042014-10-07
StatusNew id, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_65137.1Only in the parent motif
IL_92123.1
Compare
IL_1GID_011IL_1GID_004IL_1X8W_003
IL_39165.1
Compare
IL_1GID_004IL_1GID_011

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-L-cSS-tWH-tHW-L-cWW-cWW
    Heat map statistics
    Min 0.40 | Avg 0.20 | Max 0.40
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