Motif IL_92889.1 Version IL_92889.1 of this group appears in releases 3.2 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | break | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 25 | 26 | 1-26 | 2-25 | 9-14 | 10-13 | 11-12 | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V8P_216 | 4V8P | 0 | 2 | D1 | LSU rRNA | G | 1221 | A | 1222 | A | 1224 | C | 1225 | C | 1226 | A | 1227 | C | 1228 | A | 1229 | A | 1230 | A | 1231 | A | 1232 | * | U | 1326 | G | 1327 | A | 1328 | A | 1330 | A | 1331 | U | 1332 | G | 1333 | G | 1334 | A | 1335 | U | 1336 | G | 1337 | G | 1338 | C | 1339 | G | 1340 | C | 1341 | cWW | cWW | tHH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUACCACAAAA*UGAAAAUGGAUGGCGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUACCACAAA*GAAAAUGGAUGGCG | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-cWW-L-R-R-R-R-R-R-R-R-R-R-L-L-L-L-L-tHH-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: