Motif IL_93090.1 Version IL_93090.1 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | break | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-3 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2QBG_053 | 2QBG | 0.0000 | 1 | B | LSU rRNA | U | 1415 | G | 1416 | * | C | 1582 | A | 1583 | C | 1585 | A | 1586 | G | 1587 | cWW | cWW | |
| 2 | IL_4CUV_041 | 4CUV | 0.9987 | 1 | 1 | LSU rRNA | A | 1102 | G | 1104 | * | C | 977 | G | 978 | U | 979 | A | 980 | U | 981 | cWW | cWW | ncSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UG*CAUCAG | 1 |
| AAG*CGUAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *AUCA | 1 |
| A*GUA | 1 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-07 |
| Status | New id, 2 parents |
Parent motifs
| Parent motif | Common motif instances | Only in IL_93090.1 | Only in the parent motif |
|---|---|---|---|
| IL_10119.1 Compare | IL_2QBG_053 | IL_4CUV_041 | IL_4QCN_057 |
| IL_76024.1 Compare | IL_4CUV_041 | IL_2QBG_053 |
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R-cWW
- Heat map statistics
- Min 1.00 | Avg 0.50 | Max 1.00
Coloring options: