Motif IL_93952.1 Version IL_93952.1 of this group appears in releases 3.2 to 3.2
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 1-5 | 1-11 | 2-10 | 4-10 | 5-11 | 7-8 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5DCV_008 | 5DCV | 0 | 1 | Kink-turn | D | RNA (47-MER) | C | 18 | G | 19 | G | 20 | G | 22 | A | 23 | A | 24 | G | 25 | * | C | 32 | G | 33 | A | 34 | G | 35 | ncsS | cWW | tsS | tSH | tSs | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGGUGAAG*CGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGUGAA*GA | 1 |
Release history
| Release | 3.2 |
|---|---|
| Date | 2018-09-26 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Kink-turn (1)
- Basepair signature
- cWW-cSS-L-L-tSH-tSS-tHS-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: