Motif IL_96141.2 Version IL_96141.2 of this group appears in releases 3.87 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 2-10 | 3-8 | 4-7 | 5-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4WF9_074 | 4WF9 | 0.0000 | 0 | Triple sheared | X | LSU rRNA | C | 1909 | G | 1910 | A | 1911 | A | 1912 | U | 1913 | * | A | 1883 | G | 1884 | G | 1885 | A | 1886 | G | 1887 | ncWW | cSW | tHS | ntHS | cWW | |
| 2 | IL_4UYK_004 | 4UYK | 0.2797 | 0 | Triple sheared | R | SRP RNA | C | 86 | G | 87 | A | 88 | A | 89 | G | 90 | * | U | 111 | G | 112 | G | 113 | A | 114 | G | 115 | cWW | tSH | tHS | tWS | cWW | |
| 3 | IL_5J7L_310 | 5J7L | 0.2850 | 0 | Triple sheared | DA | LSU rRNA | U | 1720 | G | 1721 | A | 1722 | G | 1723 | G | 1724 | * | U | 1736 | G | 1737 | G | 1738 | A | 1739 | G | 1740 | cWW | tSH | tHS | ntHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAAU*AGGAG | 1 |
| CGAAG*UGGAG | 1 |
| UGAGG*UGGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAA*GGA | 2 |
| GAG*GGA | 1 |
Release history
| Release | 3.87 |
|---|---|
| Date | 2024-08-14 |
| Status | Updated, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Triple sheared (3)
- Basepair signature
- cWW-tSH-tHS-L-R-cWW
- Heat map statistics
- Min 0.23 | Avg 0.18 | Max 0.29
Coloring options: