Motif IL_96380.2 Version IL_96380.2 of this group appears in releases 3.3 to 3.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 1-6 | 3-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5J7L_065 | 5J7L | 0.4083 | 1 | AA | SSU rRNA | U | 1445 | A | 1446 | C | 1448 | * | G | 1455 | A | 1456 | G | 1457 | cWW | cWW |
| 2 | IL_4V9F_015 | 4V9F | 0.0000 | 3 | 0 | LSU rRNA | U | 548 | A | 551 | G | 553 | * | C | 606 | G | 607 | A | 608 | cWW | cWW |
| 3 | IL_3LQX_001 | 3LQX | 0.6079 | 3 | B | SRP RNA | U | 139 | C | 142 | G | 144 | * | C | 167 | A | 168 | A | 169 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAAC*GAG | 1 |
| UACAAG*CGA | 1 |
| UACCAG*CAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AA*A | 1 |
| ACAA*G | 1 |
| ACCA*A | 1 |
- Annotations
-
- (3)
- Basepair signature
- cWW-L-R-cWW
- Heat map statistics
- Min 0.41 | Avg 0.37 | Max 0.64
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