Motif J3_00837.1 Version J3_00837.1 of this group appears in releases 3.88 to 3.91
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | break | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 1-20 | 4-20 | 6-10 | 7-8 | 12-16 | 13-14 | 15-18 | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_6JQ6_004 | 6JQ6 | 0.0000 | 2 | U | G | 69||||11_555 | U | 70||||11_555 | A | 72||||11_555 | A | 73||||11_555 | A | 74||A||11_555 | A | 75||||11_555 | C | 77||||11_555 | * | G | 27 | U | 28 | G | 29 | G | 30 | G | 31 | G | 32 | * | U | 62 | G | 63 | C | 64 | A | 65 | G | 66 | A | 67 | C | 68 | cWW | cWS | tHS | cWW | cWW | cWW | cWH |
| 2 | J3_6JQ6_003 | 6JQ6 | 0.0002 | 2 | U | G | 69 | U | 70 | A | 72 | A | 73 | A | 74||A | A | 75 | C | 77 | * | G | 27||||11_555 | U | 28||||11_555 | G | 29||||11_555 | G | 30||||11_555 | G | 31||||11_555 | G | 32||||11_555 | * | U | 62||||11_555 | G | 63||||11_555 | C | 64||||11_555 | A | 65||||11_555 | G | 66||||11_555 | A | 67||||11_555 | C | 68||||11_555 | cWW | cWS | tHS | cWW | cWW | cWW | cWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUAAAACC*GUGGGG*UGCAGAC | 1 |
| GUGGGG*UGCAGAC*GUUAAAACC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUAAAAC*UGGG*GCAGA | 1 |
| UGGG*GCAGA*UUAAAAC | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-cWS-F-F-F-cWH-F-F-cWW-tHS-cWW-cWW-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: