Motif J3_01633.2 Version J3_01633.2 of this group appears in releases 4.7 to 4.7
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 6 | break | 7 | 8 | 1-8 | 3-4 | 6-7 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_1KUQ_001 | 1KUQ | 0.1234 | 1 | B | 16S RIBOSOMAL RNA FRAGMENT | C | 4 | G | 5 | G | 6 | * | C | 15 | U | 16 | G | 18 | * | C | 53 | G | 54 | cWW | cWW | cWW |
| 2 | J3_4LFB_011 | 4LFB | 0.0657 | 1 | A | SSU rRNA | C | 586 | G | 587 | G | 588 | * | C | 651 | U | 652 | G | 654 | * | C | 754 | G | 755 | cWW | cWW | cWW |
| 3 | J3_8B0X_002 | 8B0X | 0.0000 | 1 | A | SSU rRNA | C | 586 | G | 587 | G | 588 | * | C | 651 | U | 652 | G | 654 | * | C | 754 | G | 755 | cWW | cWW | cWW |
| 4 | J3_9H3G_030 | 9H3G | 0.6130 | 2 | h1 | SSU rRNA | U | 635 | G | 636 | A | 637 | * | U | 862 | A | 863 | A | 866 | * | U | 966 | A | 967 | cWW | cWW | cWW |
| 5 | J3_8P9A_071 | 8P9A | 0.6374 | 2 | sR | SSU rRNA | U | 633 | G | 634 | A | 635 | * | U | 861 | A | 862 | A | 865 | * | U | 965 | A | 966 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGG*CUAG*CG | 2 |
| CGG*CUUG*CG | 1 |
| UGA*UAACA*UA | 1 |
| UGA*UAAUA*UA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| G*UA* | 2 |
| G*UU* | 1 |
| G*AAC* | 1 |
| G*AAU* | 1 |
Release history
| Release | 4.7 |
|---|---|
| Date | 2026-02-25 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (5)
- Basepair signature
- cWW-F-cWW-cWW-F
- Heat map statistics
- Min 0.07 | Avg 0.36 | Max 0.71
Coloring options: