Motif J3_05170.1 Version J3_05170.1 of this group appears in releases 3.48 to 3.53
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | break | 10 | 11 | 12 | 13 | 1-13 | 3-12 | 4-5 | 4-11 | 5-8 | 7-8 | 9-10 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_7A0S_003 | 7A0S | 0.0000 | 2 | X | LSU rRNA | G | 269 | G | 270 | G | 271 | U | 272 | U | 273 | G | 274 | A | 276 | * | U | 382 | G | 383 | * | C | 246 | A | 247 | A | 248 | C | 250 | cWW | tSH | ncSH | tWH | ntWS | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAAC*GGGUUGUA*UG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAA*GGUUGU* | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-F-tSH-tWH-cSH-cWW-tWS-F-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: