Motif J3_08158.1 Version J3_08158.1 of this group appears in releases 3.88 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | break | 21 | 22 | 23 | 24 | 25 | 26 | 27 | 28 | 29 | 30 | break | 31 | 32 | 33 | 34 | 35 | 36 | 1-36 | 3-9 | 3-14 | 3-25 | 4-16 | 4-24 | 5-18 | 6-17 | 8-15 | 19-22 | 20-21 | 27-34 | 28-32 | 30-31 | ||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_7OSM_056 | 7OSM | 0.0000 | 3 | ASIT | tRNA | G | 6 | A | 7 | U | 8 | A | 9 | G | 10 | C | 11 | U | 12 | C | 13 | A | 14 | G | 15 | U | 16 | G | 19 | U | 20 | A | 21 | G | 22 | A | 23 | G | 24 | C | 25 | A | 26 | G | 27 | * | C | 43 | G | 44 | U | 45 | G | 46 | C | 48 | C | 49 | U | 50 | U | 51 | G | 52 | G | 53 | * | C | 62 | G | 63 | A | 64 | G | 65 | U | 66 | C | 67 | ncWW | ntWH | ntsS | ncsS | ncWB | ncHS | ncWW | ncWW | ncWW | ntHH | cWW | ncWW | ncWWa | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUAGCUCAGUCGGUAGAGCAG*CGUGUCCUUGG*CGAGUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUAGCUCAGUCGGUAGAGCA*GUGUCCUUG*GAGU | 1 |
Release history
| Release | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-F-cWW-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: