Motif J3_09157.1 Version J3_09157.1 of this group appears in releases 3.91 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | break | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 1-22 | 6-16 | 8-11 | 9-10 | 14-15 | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_8P9A_042 | 8P9A | 0.0000 | 4 | AR | LSU rRNA | U | 149 | A | 150 | A | 151 | U | 152 | U | 153 | U | 154 | G | 155 | A | 157 | G | 158 | * | C | 263 | G | 264 | A | 265 | A | 266 | G | 267 | * | C | 113 | A | 114 | A | 115 | A | 116 | U | 118 | U | 119 | A | 122 | A | 123 | cWW | tWH | tHS | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAAUUUGAAA*UAAUUUGGAG*CGAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAAUUUGAA*AAUUUGGA*GAA | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-tWH-F-F-tHS-cWW-cWW-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: