Motif J3_10509.1 Version J3_10509.1 of this group appears in releases 3.88 to 3.88
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | break | 16 | 17 | 18 | 19 | 20 | 21 | break | 22 | 23 | 1-23 | 11-17 | 12-16 | 14-17 | 15-16 | 21-22 | |||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_3NKB_001 | 3NKB | 0.0000 | 1 | B | The hepatitis delta virus ribozyme | C | 30 | G | 31 | C | 32 | A | 33 | A | 34 | G | 35 | C | 36 | U | 37 | G | 38 | G | 39 | G | 40 | C | 41 | A | 42 | A | 43 | C | 44 | * | G | 60 | G | 61 | C | 62 | A | 64 | A | 65 | U | 66 | * | A | 17 | G | 18 | cWW | ncWB | tWH | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AG*CGCAAGCUGGGCAAC*GGCGAAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *GCAAGCUGGGCAA*GCGAA | 1 |
Release history
| Release | 3.88 |
|---|---|
| Date | 2024-09-11 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-F-cWW-F-F-F-F-F-F-F-F-cWW-F-cWW-tWH-F-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: