#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6break 7 8 9 10 11break 12 131-134-95-86-711-12
1 J3_5TBW_0665TBW0.123501 LSU rRNAG1796A1797A1798A1799A1800U1801*A1654G1655A1656C1657G1658*C1791C1792cWWtHHtHScWWcWW
2 J3_8C3A_0558C3A0.000001 LSU rRNAG1792A1793A1794A1795A1796U1797*A1650G1651A1652C1653G1654*U1787C1788cWWtHHtHScWWcWW
3 J3_4V9F_0174V9F0.124400 LSU rRNAG1655A1656A1657A1658A1659G1660*U1531G1532A1533C1534G1535*C1650C1651cWWtHHtHScWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
AGACG*CC*GAAAAU1
AGACG*UC*GAAAAU1
UGACG*CC*GAAAAG1
Non-Watson-Crick part of the motif
SequenceCounts
GAC**AAAA3

Release history

Release3.883.89
Date2024-09-112024-10-09
StatusNew id, no parentsExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-F-cWW-F-tHH-F-tHS-cWW
    Heat map statistics
    Min 0.12 | Avg 0.09 | Max 0.16
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