Motif J3_17077.1 Version J3_17077.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 11 | break | 12 | 13 | 14 | 15 | 16 | 17 | 1-17 | 5-6 | 11-12 | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_8P9A_080 | 8P9A | 0.0000 | 1 | sR | SSU rRNA | U | 1283 | C | 1284 | U | 1286 | A | 1287 | G | 1288 | * | C | 1327 | G | 1328 | A | 1329 | G | 1330 | A | 1331 | C | 1332 | * | G | 1419 | C | 1420 | A | 1421 | A | 1422 | U | 1423 | A | 1424 | cWW | cWW | cWW |
| 2 | J3_8GLP_020 | 8GLP | 0.3598 | 1 | S2 | SSU rRNA | U | 1340 | C | 1341 | U | 1343 | A | 1344 | G | 1345 | * | C | 1384 | G | 1385 | A | 1386 | G | 1387 | A | 1388 | C | 1389 | * | G | 1481 | C | 1482 | A | 1483 | A | 1484 | U | 1485 | A | 1486 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCUUAG*CGAGAC*GCAAUA | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUUA*GAGA*CAAU | 2 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F-F-cWW-F-cWW-F-F-F-F
- Heat map statistics
- Min 0.36 | Avg 0.18 | Max 0.36
Coloring options: