Motif J3_20574.1 Version J3_20574.1 of this group appears in releases 3.88 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 1-12 | 1-14 | 3-4 | 5-13 | 6-12 | 8-11 | 9-10 | 12-14 | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_7A0S_012 | 7A0S | 0.0000 | 0 | X | LSU rRNA | C | 2769 | A | 2770 | C | 2771 | * | G | 2781 | G | 2782 | U | 2783 | A | 2784 | A | 2785 | G | 2786 | * | C | 2864 | G | 2865 | A | 2866 | G | 2867 | G | 2868 | tsS | cWW | cWW | ntWW | tWH | tHS | cWW | ncSs |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAC*GGUAAG*CGAGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A*GUAA*GAG | 1 |
Release history
| Release | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 | 3.99 | 4.0 | 4.1 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 | 2025-07-16 | 2025-08-13 | 2025-09-10 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-tWH-cWW-tSS-F-tHS-F-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: