Motif J3_22643.1 Version J3_22643.1 of this group appears in releases 4.1 to 4.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | break | 11 | 12 | 1-9 | 1-12 | 2-10 | 4-9 | 5-8 | 6-7 | 10-11 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_8ITS_001 | 8ITS | 0.0000 | 2 | A | RNA (46-MER) | G | 5 | U | 6 | U | 7 | G | 9 | A | 10 | C | 11 | * | G | 24 | G | 25 | A | 26 | A | 27 | * | U | 40 | C | 42 | tsS | cWW | cWH | tSH | tHS | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUAGAC*GGAA*UAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUAGA*GA*A | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-tSS-cWH-cWW-F-tSH-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: