#SLoop idPDBDisc#Non-coreChain(s)Standardized name for chain 1 2 3 4 5 6 7 8 9break 10 11 12 13 14 15break 16 17 18 19 201-203-194-74-186-128-119-1011-1814-1715-16
1 J3_5TBW_0605TBW0.000011 LSU rRNAC205G206U207C208A209A211G212A213G214*C226G227U228G229U230G231*C185U186A187U188G189cWWcsScWWcSWtHScWWcHHcWwcWW
2 J3_8C3A_0468C3A0.119211 LSU rRNAC204G205U206C207A208A210G211A212G213*C225G226U227G228C229G230*C184U185A186U187G188cWWcsScWWncSscSWtHScWWcHHncWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUAUG*CGUCAUAGAG*CGUGUG1
CUAUG*CGUCACAGAG*CGUGCG1
Non-Watson-Crick part of the motif
SequenceCounts
UAU*GUCAUAGA*GUGU1
UAU*GUCACAGA*GUGC1

Release history

Release3.883.893.90
Date2024-09-112024-10-092024-11-06
StatusNew id, no parentsExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-F-cSS-cHH-cWW-cWW-F-cWW-cSW-tHS-F-cWW
    Heat map statistics
    Min 0.12 | Avg 0.06 | Max 0.12
    Help

    Coloring options:

    J3_5TBW_060:J3_5TBW_060 = 0J3_5TBW_060:J3_8C3A_046 = 0.1192J3_8C3A_046:J3_5TBW_060 = 0.1192J3_8C3A_046:J3_8C3A_046 = 0J3_5TBW_060J3_8C3A_046Discrepancy0.000.020.040.060.080.10
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