Motif J3_27248.1 Version J3_27248.1 of this group appears in releases 4.6 to 4.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | break | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | break | 12 | 13 | 1-13 | 2-3 | 4-7 | 6-9 | 7-10 | 11-12 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_9HRF_001 | 9HRF | 0.0000 | 1 | A | Class V (UU) GTP aptamer | G | 21 | U | 22 | * | A | 39 | G | 40 | G | 41 | G | 42 | G | 43 | A | 45 | G | 46 | G | 47 | C | 48 | * | G | 52 | C | 53 | cWW | cWW | cWH | cWH | cWH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GU*AGGGGUAGGC*GC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *GGGGUAGG* | 1 |
Release history
| Release | 4.6 |
|---|---|
| Date | 2026-01-28 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-cWW-cWW-cWH-cWH-F-cWH-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: