Motif J3_29367.1 Version J3_29367.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | break | 5 | 6 | break | 7 | 8 | 1-8 | 4-5 | 6-7 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_5T5A_001 | 5T5A | 0.0000 | 1 | A | DNA/RNA (71-MER) | C | 13 | C | 14 | A | 15 | G | 16 | * | C | 34 | C | 35 | * | G | 46 | G | 48 | cWW | cWW | cWW |
| 2 | J3_2OIU_002 | 2OIU | 0.6838 | 0 | Q | L1 Ribozyme RNA Ligase | C | 42 | A | 43 | G | 44 | G | 45 | * | C | 7 | G | 8 | * | C | 17 | G | 18 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCAG*CC*GCG | 1 |
| CG*CG*CAGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CA**C | 1 |
| **AG | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-cWW-F-cWW
- Heat map statistics
- Min 0.68 | Avg 0.34 | Max 0.68
Coloring options: