Motif J3_32847.1 Version J3_32847.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 1-13 | 5-6 | 7-10 | 8-9 | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | J3_3IWN_003 | 3IWN | 0.0000 | 5 | A | C-di-GMP riboswitch | G | 4 | A | 8 | G | 9 | G | 10 | G | 11 | * | C | 36 | A | 38 | G | 40 | * | U | 84 | U | 85 | A | 86 | C | 87 | C | 88 | cWW | cWW | tHW | ncWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GCACAGGG*CAAAG*UUACC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
CACAGG*AAA*UAC | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-F-F-tHW-cWW-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: