Motif J3_32853.1 Version J3_32853.1 of this group appears in releases 3.88 to 3.90
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | break | 14 | 15 | 16 | break | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 1-24 | 2-24 | 5-21 | 7-19 | 8-12 | 11-16 | 11-17 | 13-14 | 16-17 | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_5TBW_089 | 5TBW | 0.0000 | 1 | 1 | LSU rRNA | G | 1250 | A | 1251 | A | 1252 | U | 1253 | C | 1254 | C | 1255 | G | 1256 | C | 1257 | U | 1258 | A | 1259 | A | 1260 | G | 1261 | G | 1262 | * | C | 1277 | A | 1278 | C | 1279 | * | G | 1230 | A | 1231 | C | 1232 | G | 1233 | G | 1234 | U | 1235 | G | 1237 | C | 1238 | ncWW | ncWS | ncWW | ncWW | tWW | ncSs | ntSs | cWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GACGGUGGC*GAAUCCGCUAAGG*CAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACGGUGG*AAUCCGCUAAG*A | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F-F-F-F-F-tWW-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: