Motif J3_33494.1 Version J3_33494.1 of this group appears in releases 3.88 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 1-12 | 3-4 | 5-9 | 10-11 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_4GXY_001 | 4GXY | 0.0000 | 0 | A | Adenosylcobalamin riboswitch | U | 10 | G | 11 | C | 12 | * | G | 33 | U | 34 | U | 35 | A | 36 | A | 37 | A | 38 | A | 39 | * | U | 162 | G | 163 | ncWW | cWW | tWH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGC*GUUAAAA*UG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| G*UUAAA* | 1 |
Release history
| Release | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-tWH-F-F-F-F-F-F-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: