#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8 9 10break 11 12 13 14 15 16 17 18break 19 20 21 22 23 24 25 261-262-64-157-228-2410-1113-2514-2316-2118-19
1 J3_5KPY_0025KPY0.00002A5-hydroxytryptophan RNA aptamerA44U45U46G47A48A49U51G52U54G55*C71U72A73A74C75A76C77G78*C18U19G20A21U22G23A24U25cWWtWHcWWntWHtSScWWtWHtWWntHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUGAUGAU*AUUGAAUUGUUG*CUAACACG1
Non-Watson-Crick part of the motif
SequenceCounts
UGAUGA*UUGAAUUGUU*UAACAC1

Release history

Release3.883.89
Date2024-09-112024-10-09
StatusNew id, no parentsExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (1)
  • Basepair signature
    cWW-tWH-tWH-F-tSS-cWW-tWW-F-F-F-F-F-cWW-F-cWW-F-F-F
    Heat map statistics
    Min 0.00 | Avg 0.00 | Max 0.00
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