Motif J3_47563.1 Version J3_47563.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | break | 12 | 13 | 14 | 15 | 1-15 | 3-13 | 7-8 | 11-12 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_5KPY_001 | 5KPY | 0.0000 | 1 | A | 5-hydroxytryptophan RNA aptamer | C | 18 | U | 19 | G | 20 | A | 21 | U | 22 | A | 24 | U | 25 | * | A | 44 | U | 45 | U | 46 | G | 47 | * | C | 75 | A | 76 | C | 77 | G | 78 | cWW | ntSH | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUGAUGAU*AUUG*CACG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGAUGA*UU*AC | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-F-F-cWW-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: