#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3break 4 5 6break 7 81-83-46-7
1 J3_4V88_0804V880.62412A6 SSU rRNAU633G634A635*U861A862A865*U965A966cWWcWWcWW
2 J3_1G1X_0011G1X0.20311D+E16S RIBOSOMAL RNAC586G587G588*C651U652G654*C754G755cWWcWWcWW
3 J3_1KUQ_0011KUQ0.13491B16S RIBOSOMAL RNA FRAGMENTC4G5G6*C15U16G18*C53G54cWWcWWcWW
4 J3_5J7L_0025J7L0.00001AA SSU rRNAC586G587G588*C651U652G654*C754G755cWWcWWcWW
5 J3_4LFB_0114LFB0.12171A SSU rRNAC586G587G588*C651U652G654*C754G755cWWcWWcWW
6 J3_6CZR_0166CZR0.201211a SSU rRNAC570G571G572*C635U636G638*C738G739cWWncWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGG*CUAG*CG4
UGA*UAAUA*UA1
CGG*CUUG*CG1
Non-Watson-Crick part of the motif
SequenceCounts
G*UA*4
G*AAU*1
G*UU*1

Release history

Release3.883.89
Date2024-09-112024-10-09
StatusUpdated, 1 parentExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (6)
  • Basepair signature
    cWW-F-cWW-cWW-F
    Heat map statistics
    Min 0.12 | Avg 0.30 | Max 0.71
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