Motif J3_58525.1 Version J3_58525.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 14 | break | 15 | 16 | 17 | 18 | 19 | 20 | 1-20 | 2-19 | 3-9 | 3-17 | 4-7 | 6-14 | 8-16 | 10-11 | 14-15 | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | J3_4FEN_001 | 4FEN | 0.0000 | 1 | B | A24U/U25A/A46G mutant of the B. subtilis xpt-pbuX guanine riboswitch aptamer domain | G | 44 | A | 45 | G | 46 | U | 47 | U | 49 | C | 50 | U | 51 | A | 52 | C | 53 | C | 54 | * | G | 72 | A | 73 | C | 74 | U | 75 | * | A | 21 | U | 22 | A | 23 | U | 24 | A | 25 | C | 26 | cWW | tSH | cWW | tSW | ntWH | cWS | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
AUAUAC*GAGUUUCUACC*GACU | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
UAUA*AGUUUCUAC*AC | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-tSH-cWW-tSW-F-F-F-cWW-cWS-cWW-F-F-F-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: