Motif J3_58525.1 Version J3_58525.1 of this group appears in releases 3.88 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | break | 17 | 18 | 19 | 20 | 1-20 | 2-14 | 3-9 | 5-8 | 6-7 | 9-15 | 10-13 | 12-20 | 16-17 | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_4FEN_001 | 4FEN | 0.0000 | 1 | B | Purine riboswitch | A | 21 | U | 22 | A | 23 | U | 24 | A | 25 | C | 26 | * | G | 44 | A | 45 | G | 46 | U | 47 | U | 49 | C | 50 | U | 51 | A | 52 | C | 53 | C | 54 | * | G | 72 | A | 73 | C | 74 | U | 75 | cWW | cWW | tWS | tHS | cWW | cWW | ntWH | cWS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUAUAC*GAGUUUCUACC*GACU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAUA*AGUUUCUAC*AC | 1 |
Release history
| Release | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 | 3.99 | 4.0 | 4.1 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 | 2025-07-16 | 2025-08-13 | 2025-09-10 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-tSH-cWW-tSW-F-F-F-cWW-cWS-cWW-F-F-F-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: