Motif J3_58957.1 Version J3_58957.1 of this group appears in releases 3.88 to 3.89
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 15 | break | 16 | 17 | 1-17 | 7-12 | 8-11 | 9-10 | 15-16 | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_3OXE_001 | 3OXE | 0.0000 | 0 | A | domain II of glycine riboswitch | C | 74 | A | 75 | A | 76 | A | 77 | A | 78 | G | 79 | G | 80 | A | 81 | C | 82 | * | G | 7 | G | 8 | A | 9 | G | 10 | A | 11 | G | 12 | * | C | 28 | G | 29 | cWW | ntSH | tHS | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAGAG*CG*CAAAAGGAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAGA**AAAAGGA | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-F-cWW-F-F-F-F-F-F-F-F-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: