Motif J3_59706.1 Version J3_59706.1 of this group appears in releases 3.88 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | break | 16 | 17 | 18 | 19 | 20 | 21 | 1-21 | 2-20 | 3-19 | 4-17 | 5-9 | 6-7 | 10-13 | 12-18 | 14-17 | 15-16 | |||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_4V9F_015 | 4V9F | 0.0000 | 1 | 0 | LSU rRNA | A | 302 | C | 303 | G | 304 | A | 305 | A | 306 | G | 307 | * | C | 323 | G | 324 | U | 325 | G | 326 | A | 327 | A | 329 | C | 330 | A | 331 | G | 332 | * | C | 344 | G | 345 | U | 346 | A | 347 | C | 348 | U | 349 | cWW | ncWB | tSH | cHH | ncSs | cWW | cWW | cSW | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| ACGAAG*CGUGAUACAG*CGUACU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CGAA*GUGAUACA*GUAC | 1 |
Release history
| Release | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-cHH-cWW-tHS-F-F-cSW-cWW-tHS-F-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: