Motif J3_59791.1 Version J3_59791.1 of this group appears in releases 3.88 to 3.89
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 14 | 15 | 16 | break | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 24 | 1-24 | 7-13 | 10-11 | 10-20 | 12-21 | 14-23 | 16-17 | 18-22 | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_6CZR_062 | 6CZR | 0.0000 | 3 | 1a | SSU rRNA | G | 951 | A | 952 | A | 955 | C | 957 | C | 958 | U | 959 | U | 960 | A | 961 | C | 962 | C | 963 | * | G | 1202 | G | 1203 | G | 1204 | C | 1205 | G | 1206 | A | 1207 | * | U | 933 | U | 934 | U | 935 | A | 936 | A | 937 | U | 938 | U | 939 | C | 940 | cWW | ncWW | cWW | ncSs | tsS | ncSH | ncWW | ntWWa |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUUAAUUC*GAAGAACCUUACC*GGGCGA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUAAUU*AAGAACCUUAC*GGCG | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-F-F-tSS-F-F-F-F-F-F-F-F-F-F-cWW-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: