Motif J3_59791.1 Version J3_59791.1 of this group appears in releases 3.88 to 3.95
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | break | 19 | 20 | 21 | 22 | 23 | 24 | 1-24 | 2-6 | 4-18 | 5-20 | 7-22 | 8-9 | 15-21 | 18-19 | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_6CZR_062 | 6CZR | 0.0000 | 3 | 1a | SSU rRNA | U | 933 | U | 934 | U | 935 | A | 936 | A | 937 | U | 938 | U | 939 | C | 940 | * | G | 951 | A | 952 | A | 955 | C | 957 | C | 958 | U | 959 | U | 960 | A | 961 | C | 962 | C | 963 | * | G | 1202 | G | 1203 | G | 1204 | C | 1205 | G | 1206 | A | 1207 | ncWW | ntWWa | ncsS | tSs | ncHS | cWW | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUUAAUUC*GAAGAACCUUACC*GGGCGA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUAAUU*AAGAACCUUAC*GGCG | 1 |
Release history
| Release | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 |
|---|---|---|---|---|---|---|---|---|
| Date | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-F-F-tSS-F-F-F-F-F-F-F-F-F-F-cWW-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: