#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6break 7 8 9break 10 11 12 131-132-52-124-84-96-78-119-10
1 J3_5J7L_0495J7L0.00002DB 5S rRNAG10C11C12G13A15G16*C68G69C70*G106G107A109C110cWWntsSncSWntSScWWtHScWW
2 J3_5KTJ_0015KTJ0.76640A+BPistol (50-MER) + RNA (15-mer)G28U29U30A31G32G33*C41G42G43*C9G10U11C12cWWcwWncsScWWtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GCCGUAG*CGC*GGAAC1
GUUAGG*CGG*CGUC1
Non-Watson-Crick part of the motif
SequenceCounts
CCGUA*G*GAA1
UUAG*G*GU1

Release history

Release3.88
Date2024-09-11
StatusNew id, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-F-F-F-tHS-F-cWW-F-cWW
    Heat map statistics
    Min 0.77 | Avg 0.38 | Max 0.77
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