Motif J3_69856.1 Version J3_69856.1 of this group appears in releases 4.10 to 4.10
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 1-15 | 3-4 | 5-12 | 6-11 | 7-14 | 8-9 | 10-14 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_9PN5_042 | 9PN5 | 0.0000 | 3 | B5 | SSU rRNA | A | 1336 | A | 1337 | C | 1338 | * | G | 1386 | G | 1387 | A | 1388 | C | 1389 | A | 1391 | * | U | 1407 | G | 1408 | G | 1409 | A | 1410 | A | 1411 | G | 1412 | PSU | 1415 | cWW | cWW | tSW | tWS | cWW | cWW | tWH |
| 2 | J3_8CRE_085 | 8CRE | 0.1005 | 3 | CM | SSU rRNA | A | 1321 | A | 1322 | C | 1323 | * | G | 1372 | G | 1373 | A | 1374 | C | 1375 | A | 1377 | * | U | 1393 | G | 1394 | G | 1395 | A | 1396 | A | 1397 | G | 1398 | U | 1401 | cWW | cWW | tSW | tWS | cWW | cWW | tWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAC*GGACUA*UGGAAGUUPSU | 1 |
| AAC*GGACUA*UGGAAGUUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A*GACU*GGAAGUU | 2 |
Release history
| Release | 4.10 |
|---|---|
| Date | 2026-05-20 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-tWH-cWW-cWW-F-tSW-tWS-cWW
- Heat map statistics
- Min 0.10 | Avg 0.05 | Max 0.10
Coloring options: