Motif J3_71753.1 Version J3_71753.1 of this group appears in releases 3.92 to 3.96
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 1-17 | 3-16 | 5-6 | 10-11 | 10-14 | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_6JQ6_001 | 6JQ6 | 0.0000 | 2 | U | RNA (81-MER) | G | 27||||11_555 | U | 28||||11_555 | G | 29||||11_555 | G | 30||||11_555 | G | 31||||11_555 | * | C | 64||||11_555 | A | 65||||11_555 | G | 66||||11_555 | A | 67||||11_555 | C | 68||||11_555 | * | G | 69 | U | 70 | A | 72 | A | 73 | A | 74||A | A | 75 | C | 77 | cWW | tSH | cWW | cWW | cSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUGGG*CAGAC*GUUAAAACC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGG*AGA*UUAAAAC | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-cWS-F-F-F-F-F-F-cWW-tHS-cWW-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: