Motif J3_75076.1 Version J3_75076.1 of this group appears in releases 3.88 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | break | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | break | 24 | 25 | 26 | 27 | 28 | 29 | 30 | 31 | 32 | 33 | 34 | 1-34 | 3-20 | 4-5 | 4-21 | 5-25 | 6-22 | 7-33 | 8-32 | 9-31 | 10-30 | 11-29 | 12-28 | 13-26 | 14-17 | 15-16 | 23-24 | ||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_8T29_002 | 8T29 | 0.0000 | 2 | R | RNA (90-MER) | U | 14 | A | 16 | G | 17 | G | 19 | G | 20 | A | 21 | C | 22 | C | 23 | U | 24 | A | 25 | C | 26 | C | 27 | C | 28 | A | 29 | C | 30 | * | G | 46 | G | 47 | A | 48 | A | 49 | C | 50 | U | 51 | U | 52 | C | 53 | * | G | 67 | C | 68 | G | 69 | A | 70 | G | 71 | G | 72 | U | 73 | A | 74 | G | 75 | G | 76 | G | 77 | cWW | cWW | ncSH | tWS | cWW | cHW | cWW | cWW | cWW | cWW | cWW | cWW | cWW | ncWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGAGGGGACCUACCCAC*GGAACUUC*GCGAGGUAGGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAGGGGACCUACCCA*GAACUU*CGAGGUAGG | 1 |
Release history
| Release | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-cWW-cWW-cWW-tWS-cWW-cWW-cWW-cHW-cWW-cWW-F-cWW-cWW-F-cWW-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: