Motif J3_80708.1 Version J3_80708.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | break | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 4-8 | 6-7 | 8-9 | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | J3_3E5C_001 | 3E5C | 0.0000 | 0 | A | SMK box (SAM-III) Riboswitch | U | 35 | G | 36 | U | 37 | A | 38 | A | 39 | C | 40 | * | G | 47 | G | 48 | * | C | 6 | G | 7 | A | 8 | A | 9 | cWW | ntSH | tWS | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CGAA*UGUAAC*GG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GA*GUAA* | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-F-tWS-cWW-F-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: