#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7break 8 9 10break 11 12 13 14 15 161-162-63-134-126-147-810-1115-16
1 J3_8C3A_0868C3A0.00002CM SSU rRNAU1393G1394G1395A1396A1397G1398U1401*A1321A1322C1323*G1372G1373A1374C1375U1376A1377cWWtWHtSWtWScWWcWWcWWncSH
2 J3_8P9A_0838P9A0.20992sR SSU rRNAU1407G1408G1409A1410A1411G1412U1415*A1336A1337C1338*G1386G1387A1388C1389U1390A1391cWWtWHtSWtWScWWcWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
AAC*GGACUA*UGGAAGUUU2
Non-Watson-Crick part of the motif
SequenceCounts
A*GACU*GGAAGUU2

Release history

Release3.913.923.933.94
Date2024-12-042025-01-012025-01-292025-02-26
StatusNew id, 1 parentExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-tWH-F-tSW-cWW-tWS-F-cWW-cWW-F
    Heat map statistics
    Min 0.21 | Avg 0.10 | Max 0.21
    Help

    Coloring options:

    J3_8C3A_086:J3_8C3A_086 = 0J3_8C3A_086:J3_8P9A_083 = 0.2099J3_8P9A_083:J3_8C3A_086 = 0.2099J3_8P9A_083:J3_8P9A_083 = 0J3_8C3A_086J3_8P9A_083Discrepancy0.000.050.100.150.20
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