Motif J3_86230.1 Version J3_86230.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 3-4 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_6ZDQ_001 | 6ZDQ | 0.0000 | 1 | C | RNA | A | 1263 | A | 1264 | G | 1265 | * | C | 1290 | A | 1292 | * | U | 1319 | G | 1320 | U | 1321 | U | 1322 | cWW | cWW | cWW |
| 2 | J3_6ZDP_001 | 6ZDP | 0.2618 | 1 | B | Chains: B | A | 1294 | A | 1295 | G | 1296 | * | C | 1322 | A | 1324 | * | U | 1340 | G | 1341 | C | 1342 | U | 1343 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAG*CAA*UGUU | 1 |
| AAG*CAA*UGCU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A*A*GU | 1 |
| A*A*GC | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-cWW-F-cWW
- Heat map statistics
- Min 0.26 | Avg 0.13 | Max 0.26
Coloring options: