Motif J3_89145.1 Version J3_89145.1 of this group appears in releases 3.89 to 3.95
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 1-4 | 1-10 | 2-3 | 2-9 | 6-7 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_4LFB_017 | 4LFB | 0.0000 | 0 | A | SSU rRNA | U | 1073 | G | 1074 | * | U | 1083 | G | 1084 | U | 1085 | U | 1086 | * | G | 1099 | C | 1100 | A | 1101 | A | 1102 | cWW | cWW | tsS | cWWa | |
| 2 | J3_6CZR_079 | 6CZR | 0.1541 | 0 | 1a | SSU rRNA | U | 1056 | G | 1057 | * | U | 1066 | G | 1067 | U | 1068 | U | 1069 | * | G | 1082 | C | 1083 | A | 1084 | A | 1085 | ntHS | cWW | cWW | ntsS | ncWWa |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UG*UGUU*GCAA | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *GU*CA | 2 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 |
|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tSS-F-cWW-F-cWW-F
- Heat map statistics
- Min 0.15 | Avg 0.08 | Max 0.15
Coloring options: